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View MIRA Vs Newbler

NEWBLER ROYA ASSEMBLY

We got 45224 Contigs from Newbler Assembler program with 1x coverage and an average length of 350 bp. We only receive ~516000 reads from about 900.000 that were used in the assembly process. The detail information is accessible through the following link: Roya_Newbler_Assembly

Newbler_Assembly.png

MIRA ROYA ASSEMBLY

Based on the Newbler ACE file , It was possible to extract the cleaning sequences and then the assembly was performed using the following command:

mira —project=ro454F3 —job=denovo,genome,normal,454 454_SETTINGS -LR:mxti=no -CL:qc=no > log.txt

The detail information is accessible through the following link: Roya_Mira_Assembly

Mira_Assembly.png