Navigation

 ·   Wiki Home
 ·   Data Processing
 ·   Hemileia vastatrix
 ·   Hypothenemus hampei
 ·   Coffea
 ·   Beauveria bassiana
 ·  
 ·   Title List
 ·   Uncategorized Pages
 ·   Random Page
 ·   Recent Changes
 ·   Wiki Help
 ·   What Links Here

Active Members:

Search:

 

Create or Find Page:

 

View Expression Analysis Caturra H20 Caturra IncubationP - CLCAssemblyAll454HvCatIllum

Map the reads for each strain to the reference genome

/opt/tophat-1.3.3/bin/tophat -r 100 -o tophatCatH20 ../cufflinksCLCAssemblyAll454HvCatIllum/CLCAssemblyAll454HvCatIllum ../RNA_seq_coffeerust/Caturra_H20.fastq &