Navigation

 ·   Wiki Home
 ·   Data Processing
 ·   Hemileia vastatrix
 ·   Hypothenemus hampei
 ·   Coffea
 ·   Beauveria bassiana
 ·  
 ·   Title List
 ·   Uncategorized Pages
 ·   Random Page
 ·   Recent Changes
 ·   Wiki Help
 ·   What Links Here

Active Members:

Search:

 

Create or Find Page:

 

View Beauveria bassiana

Organism: Beauveria bassiana
Leader: Carmenza Gongora

Nro Sequencing Center Genome Trancriptome Files Files Description Process Description Server Start Date End Date Results
Bb_21 BGI Transcriptome Bb9119_peps70 Peptides greater 70 bp predicted by maker-augustus Gene families with OrthoMCL Wayu 25-04-2012 25-04-2012 Beauveria bassiana Gene Families with OrthoMCL
Bb_20 BGI Genome Bb9119_1_trim.fasta Illumina Reads Bb9119 Comparisson between CLC and Velvet assembly with AMOS and FRCurve Ticuna 25-02-2012 01-03-2012 Comparisson between CLC and Velvet assembly with AMOS and FRCurve
Bb_19 BGI Genome Bb9001_Clean_CLC.fasta, Bb9024_Clean_CLC.fasta, Bb9119_Clean_CLC.fasta, Bb9205_Clean_CLC.fasta All assemblies Extract differencial contigs in all assemblies Ticuna 07-02-2012 07-02-2012 Unique and shared contigs in CLC assemblies
Bb_18 BGI Genome Bb9119Bb9205Reads_trim_NoDuplicates.fasta Bb9119-bb9205 Concatenated Reads Assembly of Bb9119 Bb9205 Reads Ticuna 12-12-2011 12-12-2011 Assembly of Bb9119-Bb9205 Beauveria Reads
Bb_17 BGI Genome BbAllReads_trim_NoDuplicates.fasta All Concatenated Reads Assembly of All Reads Ticuna 12-12-2011 12-12-2011 Assembly of All Beauveria Concatening Reads
Bb_16 BGI Genome BbAllAsmContigsCLC.fasta All CLC concatenated Assemblies Assembly of Assemblies Ticuna 06-12-2011 07-12-2011 Assembly of Assemblies
Bb_15 BGI Genome Bb9001_trim_NoDuplicates.fasta Bb9024_trim_NoDuplicates.fasta Bb9119_trim_NoDuplicates.fasta Bb9205_trim_NoDuplicates.fasta Trim Files Assembly All Redas Beauveria Ticuna 06-12-2011 06-12-2011 Assembly All Reads Beauveria
Bb_13 BGI Genome Assemblied Files Annotation Ticuna-Tunebo-Pijao 10-11-2011 21-11-2011 Beauveria bassiana Annotation
Bb_14 BGI Genome BbassianaR50Cenicafe.fasta, Assemblied Files ESTs Beauveria Cenicafe Assembly Files with CLC-Velvet Mapping Ticuna-Wayu 06-12-2011 06-12-2011 Mapping ESTs to Assemblies
Bb_13 BGI Genome Assemblied Files Annotation Ticuna-Tunebo-Pijao 10-11-2011 21-11-2011 Beauveria bassiana Annotation

First Round of Assemblies

Nro Sequencing Center Genome Trancriptome Files Files Description Process Description Server Start Date End Date Results
Bb_12 BGI Genome Bb9001_1.fastq,Bb9001_2.fastq, Bb9024_1.fastq,Bb9024_2.fastq, Bb9119_1.fastq,Bb9119_2.fastq, Bb9205_1.fastq,Bb9205_2.fastq Raw Files Assembly Summary Ticuna 26-10-2011 26-10-2011 Beauveria bassiana Assembly summary
Bb_11.1 BGI Genome Bb9205_1.fastq, Bb9205_2.fastq Raw Files Cleaning data assembly with CLC Ticuna 15-10-2011 25-10-2011 Bb9205 CLC Assembly
Bb_11 BGI Genome Bb9205_1.fastq, Bb9205_2.fastq Raw Files Cleaning data assembly with Velvet Ticuna 15-10-2011 25-10-2011 Bb9205 Velvet Assembly
Bb_10 BGI Genome Bb9119_1.fastq, Bb9119_2.fastq Raw Files Cleaning data assembly with Velvet Ticuna 15-10-2011 25-10-2011 Bb9119 Velvet Assembly
Bb_09 BGI Genome Bb9024_1.fastq, Bb9024_2.fastq Raw Files Cleaning data assembly with CLC Ticuna 5-10-2011 10-10-2011 Bb9024 CLC Assembly
Bb_08 BGI Genome Bb9024_1.fastq, Bb9024_2.fastq Raw Files Cleaning data assembly with Velvet Ticuna 5-10-2011 10-10-2011 Bb9024 Velvet Assembly
Bb_05 BGI Genome Bb9001_1.fastq, Bb9001_2.fastq Raw Files Assembly raw data with SSAKE Ticuna 10-10-2011 12-10-2011 Bb9001 Ssake Assembly
Bb_04.1 BGI Genome Bb9001_1.fastq, Bb9001_2.fastq Raw Files Cleaning data and assembly with CLC Ticuna 05-10-2011 10-10-2011 Bb9001 CLC Assembly
Bb_04 BGI Genome Bb9001_1.fastq, Bb9001_2.fastq Raw Files Cleaning data and assembly with Velvet Ticuna 05-10-2011 10-10-2011 Triming Bb9001 and Velvet Assembly
Bb_01 BGI Genome Bb9001_1.fastq.gz, Bb9001_2.fastq.gz, Bb9024_1.fastq.gz, Bb9024_2.fastq.gz, Bb9119_1.fastq.gz, Bb9119_2.fastq.gz, Bb9205_1.fastq.gz, Bb9205_2.fastq.gz Download files Download files to /data/process/Beauveria/RawDataBauveria/Illumina Ticuna 23-09-2011 24-09-2011 Bb 01